CDS

Accession Number TCMCG017C28585
gbkey CDS
Protein Id OMO65523.1
Location complement(join(175079..175426,175607..175912,176142..176446,176554..176656,176754..176857,177414..177603,177716..179239))
GeneID InterPro:IPR003890
Organism Corchorus olitorius
locus_tag COLO4_31193

Protein

Length 959aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020828.1
Definition MIF4G-like, type 3 [Corchorus olitorius]
Locus_tag COLO4_31193

EGGNOG-MAPPER Annotation

COG_category K
Description Pre-mRNA-splicing factor CWC22 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13100        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071006        [VIEW IN EMBL-EBI]
GO:0071012        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTTCACCTAGTAGAGATAGAAGGCGAGAAAAATACAGAATTCGTGATGATGATGATGATGATAGGAGGAGTAGGAGAGATATAGCAGCAAATTCTGGATCCTCTGACGAGGACAAGAAACGAGACAAGAGAGATGGGAGGGGAGAAAGGGATCGAAGTACTAGGCATGACAATGCTAAGAGTACGCGGAGAGATATAGTGGAGAAGAATTCTGAATCCTCTAATGAGGAGGAAGAGAACGGAGCCAAGGGAGATAGGGATAGAAGTACAAGGCATGGCGGTGATAGGAGCAGGCGAAGAGACAAAGTGGAGGAGAAGTCTGAATCTTCTGATGAGGAAAAGAAGCGAGCCCAGGGAGATAGGAGGGGAGAAAGGGATAGAAGTACAAGGCATGACGATGATAGGAGCAGGCGAAGAGACAAAGTGGAGGAGAAGTCTGAATCCTCTGATGAGGAAGAGAAGCGAGCCAAGAGAGATAGGAGGGGAGAAAGGGATAGAAGTACAAGGCATGATGATGATAGGAGCAGGCGTAGAGATAAAGCGGAGGAGAATTCTGAATCCTCCGATGAGGAAGAGAAGCGAGCCAAGAGAGATAGGAGGGGAGAAAGGGATAGAAGTTCAAGGCATGATGATGATAGGAGCAGGCGTAGAGATAAAGCGGAGGAGAAATCTGAATCCTCCGATGAGGAAGAGAAGCGAGCCGAGAGAGATAGGAGGGGAGAAAGGGATAGAAGTTCAAGGCATGATGATGATAGGAGCAGGCGTAGAGATAAAGTGGAGGAGAATTCTGAATCCTCCGATGAGGAAGAGAAGCAAGCCAAGAGAGATAGGAGGGAAGAAAGGGATAGAAGTACTAAGCATGGCCATGGACATAGAAGTAGGCATGATCGCAGACGGCGGGAATCTGAAGAAGATAGGTATAGACATAGGGACAGGCGCCGCCATTCGCGGCATGATTCAGATGATGATGAGGATCACAGAAGAAGGTCCCATAGAAAATCAGAACGTGAGAATAAAAGTGATGGAAGAGACAATGGTAATCAGCCAAGTCGTAGAAGCAGAGATGATAAGGAGAAAGAGGAAGGGGAAATCGAACAGAATGAGCCAGCTTTGCAACAAACCAACTTGAATGGTAATTCCGCCAATTTAGGTAGGAGTGGAGGAGTTTATATTCCTCCATTTAAATTAGCAAGAATGATGAAAGAGACACAGGATAAGAGCAGTGTTGAGTATCAGCGATTAACATGGGATGCACTTAGAAAAAGTATCAATGGACTTGTTAACAAAGTCAATGCTACTAATATAAAAAATATTATTCCGGAACTCTTTGCTGAGAATCTGATTCGAGGAAGGGGTCTCTTCTGTCGTTCATGTATGAAATCTCAGATGGCATCTCCGGGTTTCACAGATGTTTTTGCTGCATTGGTGGCTGTTGTTAATACCAAGTTTCCTGAAGTGGGAGAGTTATTGTTGAGAAGGATTGTTTTGCAGCTAAAGAGGGCATATAAGCGGAATGACAAGCCTCAACTATTAGCTGCTGTTAAGTTTATAGCACATCTTGTGAATCAGCAAGTGGCTCACGAGATTATTGCTTTGGAACTGCTCACTGTTTTGCTAGAGAATCCTACTGATGACAGTGTTGAGGTTGCTGTTGGTTTTGTTACTGAGTGTGGATCATTACTTCAGGATCTTTCGCCAAAAGGCCTACATGGTATTTTTGAACGTTTTCGGGGGATTCTTCATGAAGGAGAGATAGATAAACGTGTTCAATTTCTGATAGAGGGCTTATTTGCTATAAGGAAAGCCAAGTTTCAGGGATACCCTGCTGTTCGTCCAGAACTAGACCTTGTTGAGCAGGAGGACCAATTAACTCATGAAATCTCTCTCCAAGATGAGATAGATCCAGAGATTACCCTTGACATCTTTAAAGCAGATCCTCACTTCTTGGAGAATGAAAAGCGCTATGAAGAGTTGAAGAAAACGATCCTCGGTGAGGATTCTGAGGATGAAGAGGGTTCTGATGCGGCCTCAGGTGAGGATGAGGATGACGATGAAGAAGATGAATCTGATGAAGAAAATGAGGAGCAGATGAGAATAAAAGATGAGACAGAGACGAATCTTGTAAATCTTAGGAGGACAATCTACCTGACAATCATGTCCAGTGCAACTTATGAGGAGGCTGGCCACAAGCTCCTGAAAATTAAGCTTGAGCCAGGTCAAGAGATGGAGTTATGCATTATGCTCTTGGAGTGCTGCAGTCAGGAGAGAACTTACCTTTCATTGTATGGTCTGTTGGGGGAACGTTTTTGCATGATTAACAAAGTTCATCAGGAAAATTTTGAGAAGTGCTTCGTTCAGCAGTATTCTATGATTCATCGTCTTGAAACAAACAAGTTACGTAATGTGGCGAAGTTTTTTGCACATTTACTTGGCACAGATGCTTTGCCTTGGCATGTTCTAGCCTATATACGATTAACTGAGGAGGATACAACATCTTCTTCTCGAATATTTATCAAGATTCTCTTCCAGGAACTGTCGGAGCATCTTGGGATTCGCAGATTAAATGAGCGGCTTTCAGATCCCACAATGCAGGATTCATTTGAATCAATTTTCCCAAGAGATAATCCAAAGAACACTCGATTTGCCATCAACTTTTTTACTTCCATTGGGCTTGGTGGTATCACTGAGAACTTGCGTGAGTATTTGAAGAACATGCCACGGCTTATCATGCAACAACAGAAACCAGCATCCGATTCCGAATCCGGGGGTTCAAGTTCTTCTGATTCAGGAACTTCCAGTTCAGAGTCCGAGTCTGAGTCAGAATCATCAAGTTCTGATGAAAGTGAAAAGCATAGAAAGAAGAGGAGGAGGAAATAG
Protein:  
MPSPSRDRRREKYRIRDDDDDDRRSRRDIAANSGSSDEDKKRDKRDGRGERDRSTRHDNAKSTRRDIVEKNSESSNEEEENGAKGDRDRSTRHGGDRSRRRDKVEEKSESSDEEKKRAQGDRRGERDRSTRHDDDRSRRRDKVEEKSESSDEEEKRAKRDRRGERDRSTRHDDDRSRRRDKAEENSESSDEEEKRAKRDRRGERDRSSRHDDDRSRRRDKAEEKSESSDEEEKRAERDRRGERDRSSRHDDDRSRRRDKVEENSESSDEEEKQAKRDRREERDRSTKHGHGHRSRHDRRRRESEEDRYRHRDRRRHSRHDSDDDEDHRRRSHRKSERENKSDGRDNGNQPSRRSRDDKEKEEGEIEQNEPALQQTNLNGNSANLGRSGGVYIPPFKLARMMKETQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLQDEIDPEITLDIFKADPHFLENEKRYEELKKTILGEDSEDEEGSDAASGEDEDDDEEDESDEENEEQMRIKDETETNLVNLRRTIYLTIMSSATYEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLSLYGLLGERFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRRLNERLSDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKPASDSESGGSSSSDSGTSSSESESESESSSSDESEKHRKKRRRK